Stable version 0.4.1

This is purely a bugfix bump because I botched the
0.4.0 cabal file and subsequent Hackage release :|

.ghci

@@ -0,0 +1 @@
+:set -idist/build/autogen

.gitignore

@@ -1,7 +1,15 @@
-*.hi
+# Created by http://www.gitignore.io
-*.o
+
-.tests
+### Haskell ###
-jsoncheck
-shellcheck
-shellcheck.1
 dist
+cabal-dev
+*.o
+*.hi
+*.chi
+*.chs.h
+.virtualenv
+.hsenv
+.cabal-sandbox/
+cabal.sandbox.config
+cabal.config
+

LICENSE

@@ -1,5 +1,5 @@
-                    GNU AFFERO GENERAL PUBLIC LICENSE
+                    GNU GENERAL PUBLIC LICENSE
-                       Version 3, 19 November 2007
+                       Version 3, 29 June 2007
 
  Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
  Everyone is permitted to copy and distribute verbatim copies
@@ -7,15 +7,17 @@
 
                             Preamble
 
-  The GNU Affero General Public License is a free, copyleft license for
+  The GNU General Public License is a free, copyleft license for
-software and other kinds of works, specifically designed to ensure
+software and other kinds of works.
-cooperation with the community in the case of network server software.
 
   The licenses for most software and other practical works are designed
 to take away your freedom to share and change the works.  By contrast,
-our General Public Licenses are intended to guarantee your freedom to
+the GNU General Public License is intended to guarantee your freedom to
 share and change all versions of a program--to make sure it remains free
-software for all its users.
+software for all its users.  We, the Free Software Foundation, use the
+GNU General Public License for most of our software; it applies also to
+any other work released this way by its authors.  You can apply it to
+your programs, too.
 
   When we speak of free software, we are referring to freedom, not
 price.  Our General Public Licenses are designed to make sure that you
@@ -24,34 +26,44 @@ them if you wish), that you receive source code or can get it if you
 want it, that you can change the software or use pieces of it in new
 free programs, and that you know you can do these things.
 
-  Developers that use our General Public Licenses protect your rights
+  To protect your rights, we need to prevent others from denying you
-with two steps: (1) assert copyright on the software, and (2) offer
+these rights or asking you to surrender the rights.  Therefore, you have
-you this License which gives you legal permission to copy, distribute
+certain responsibilities if you distribute copies of the software, or if
-and/or modify the software.
+you modify it: responsibilities to respect the freedom of others.
 
-  A secondary benefit of defending all users' freedom is that
+  For example, if you distribute copies of such a program, whether
-improvements made in alternate versions of the program, if they
+gratis or for a fee, you must pass on to the recipients the same
-receive widespread use, become available for other developers to
+freedoms that you received.  You must make sure that they, too, receive
-incorporate.  Many developers of free software are heartened and
+or can get the source code.  And you must show them these terms so they
-encouraged by the resulting cooperation.  However, in the case of
+know their rights.
-software used on network servers, this result may fail to come about.
-The GNU General Public License permits making a modified version and
-letting the public access it on a server without ever releasing its
-source code to the public.
 
-  The GNU Affero General Public License is designed specifically to
+  Developers that use the GNU GPL protect your rights with two steps:
-ensure that, in such cases, the modified source code becomes available
+(1) assert copyright on the software, and (2) offer you this License
-to the community.  It requires the operator of a network server to
+giving you legal permission to copy, distribute and/or modify it.
-provide the source code of the modified version running there to the
-users of that server.  Therefore, public use of a modified version, on
-a publicly accessible server, gives the public access to the source
-code of the modified version.
 
-  An older license, called the Affero General Public License and
+  For the developers' and authors' protection, the GPL clearly explains
-published by Affero, was designed to accomplish similar goals.  This is
+that there is no warranty for this free software.  For both users' and
-a different license, not a version of the Affero GPL, but Affero has
+authors' sake, the GPL requires that modified versions be marked as
-released a new version of the Affero GPL which permits relicensing under
+changed, so that their problems will not be attributed erroneously to
-this license.
+authors of previous versions.
+
+  Some devices are designed to deny users access to install or run
+modified versions of the software inside them, although the manufacturer
+can do so.  This is fundamentally incompatible with the aim of
+protecting users' freedom to change the software.  The systematic
+pattern of such abuse occurs in the area of products for individuals to
+use, which is precisely where it is most unacceptable.  Therefore, we
+have designed this version of the GPL to prohibit the practice for those
+products.  If such problems arise substantially in other domains, we
+stand ready to extend this provision to those domains in future versions
+of the GPL, as needed to protect the freedom of users.
+
+  Finally, every program is threatened constantly by software patents.
+States should not allow patents to restrict development and use of
+software on general-purpose computers, but in those that do, we wish to
+avoid the special danger that patents applied to a free program could
+make it effectively proprietary.  To prevent this, the GPL assures that
+patents cannot be used to render the program non-free.
 
   The precise terms and conditions for copying, distribution and
 modification follow.
@@ -60,7 +72,7 @@ modification follow.
 
   0. Definitions.
 
-  "This License" refers to version 3 of the GNU Affero General Public License.
+  "This License" refers to version 3 of the GNU General Public License.
 
   "Copyright" also means copyright-like laws that apply to other kinds of
 works, such as semiconductor masks.
@@ -537,45 +549,35 @@ to collect a royalty for further conveying from those to whom you convey
 the Program, the only way you could satisfy both those terms and this
 License would be to refrain entirely from conveying the Program.
 
-  13. Remote Network Interaction; Use with the GNU General Public License.
+  13. Use with the GNU Affero General Public License.
-
-  Notwithstanding any other provision of this License, if you modify the
-Program, your modified version must prominently offer all users
-interacting with it remotely through a computer network (if your version
-supports such interaction) an opportunity to receive the Corresponding
-Source of your version by providing access to the Corresponding Source
-from a network server at no charge, through some standard or customary
-means of facilitating copying of software.  This Corresponding Source
-shall include the Corresponding Source for any work covered by version 3
-of the GNU General Public License that is incorporated pursuant to the
-following paragraph.
 
   Notwithstanding any other provision of this License, you have
 permission to link or combine any covered work with a work licensed
-under version 3 of the GNU General Public License into a single
+under version 3 of the GNU Affero General Public License into a single
 combined work, and to convey the resulting work.  The terms of this
 License will continue to apply to the part which is the covered work,
-but the work with which it is combined will remain governed by version
+but the special requirements of the GNU Affero General Public License,
-3 of the GNU General Public License.
+section 13, concerning interaction through a network will apply to the
+combination as such.
 
   14. Revised Versions of this License.
 
   The Free Software Foundation may publish revised and/or new versions of
-the GNU Affero General Public License from time to time.  Such new versions
+the GNU General Public License from time to time.  Such new versions will
-will be similar in spirit to the present version, but may differ in detail to
+be similar in spirit to the present version, but may differ in detail to
 address new problems or concerns.
 
   Each version is given a distinguishing version number.  If the
-Program specifies that a certain numbered version of the GNU Affero General
+Program specifies that a certain numbered version of the GNU General
 Public License "or any later version" applies to it, you have the
 option of following the terms and conditions either of that numbered
 version or of any later version published by the Free Software
 Foundation.  If the Program does not specify a version number of the
-GNU Affero General Public License, you may choose any version ever published
+GNU General Public License, you may choose any version ever published
 by the Free Software Foundation.
 
   If the Program specifies that a proxy can decide which future
-versions of the GNU Affero General Public License can be used, that proxy's
+versions of the GNU General Public License can be used, that proxy's
 public statement of acceptance of a version permanently authorizes you
 to choose that version for the Program.
 
@@ -633,29 +635,40 @@ the "copyright" line and a pointer to where the full notice is found.
     Copyright (C) <year>  <name of author>
 
     This program is free software: you can redistribute it and/or modify
-    it under the terms of the GNU Affero General Public License as published by
+    it under the terms of the GNU General Public License as published by
     the Free Software Foundation, either version 3 of the License, or
     (at your option) any later version.
 
     This program is distributed in the hope that it will be useful,
     but WITHOUT ANY WARRANTY; without even the implied warranty of
     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU Affero General Public License for more details.
+    GNU General Public License for more details.
 
-    You should have received a copy of the GNU Affero General Public License
+    You should have received a copy of the GNU General Public License
     along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 Also add information on how to contact you by electronic and paper mail.
 
-  If your software can interact with users remotely through a computer
+  If the program does terminal interaction, make it output a short
-network, you should also make sure that it provides a way for users to
+notice like this when it starts in an interactive mode:
-get its source.  For example, if your program is a web application, its
+
-interface could display a "Source" link that leads users to an archive
+    <program>  Copyright (C) <year>  <name of author>
-of the code.  There are many ways you could offer source, and different
+    This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
-solutions will be better for different programs; see section 13 for the
+    This is free software, and you are welcome to redistribute it
-specific requirements.
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, your program's commands
+might be different; for a GUI interface, you would use an "about box".
 
   You should also get your employer (if you work as a programmer) or school,
 if any, to sign a "copyright disclaimer" for the program, if necessary.
-For more information on this, and how to apply and follow the GNU AGPL, see
+For more information on this, and how to apply and follow the GNU GPL, see
 <http://www.gnu.org/licenses/>.
+
+  The GNU General Public License does not permit incorporating your program
+into proprietary programs.  If your program is a subroutine library, you
+may consider it more useful to permit linking proprietary applications with
+the library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.  But first, please read
+<http://www.gnu.org/philosophy/why-not-lgpl.html>.

Makefile

@@ -1,24 +0,0 @@
-# TODO: Phase out Makefile in favor of Cabal
-
-GHCFLAGS=-O9
-
-all: shellcheck .tests shellcheck.1
-	: Done
-	
-shellcheck: regardless
-	: Conditionally compiling shellcheck
-	ghc $(GHCFLAGS) --make shellcheck
-
-.tests: *.hs */*.hs
-	: Running unit tests
-	./test/runQuack && touch .tests
-
-shellcheck.1: shellcheck.1.md
-	pandoc -s -t man $< -o $@
-
-clean:
-	rm -f .tests shellcheck shellcheck.1
-	rm -f *.hi *.o ShellCheck/*.hi ShellCheck/*.o
-	rm -rf dist
-
-regardless:

README

@@ -1,44 +0,0 @@
-ShellCheck - A shell script static analysis tool
-http://www.vidarholen.net/contents/shellcheck
-
-Copyright 2012, Vidar 'koala_man' Holen
-Licensed under the GNU Affero General Public License, v3
-
-The goals of ShellCheck are:
-
-  - To point out and clarify typical beginner's syntax issues,
-    that causes a shell to give cryptic error messages.
-
-  - To point out and clarify typical intermediate level semantic problems,
-    that causes a shell to behave strangely and counter-intuitively.
-
-  - To point out subtle caveats, corner cases and pitfalls, that may cause an
-    advanced user's otherwise working script to fail under future circumstances.
-
-ShellCheck is written in Haskell, and requires GHC, Parsec3 and Text.Regex. 
-To build the JSON interface and run the unit tests, it also requires QuickCheck2 and JSON.
-
-On Fedora, these can be installed with:
-  yum install cabal-install ghc ghc-parsec-devel ghc-QuickCheck-devel ghc-json-devel ghc-regex-compat-devel
-
-On Ubuntu and similar, use:
-  apt-get install ghc libghc-parsec3-dev libghc-json-dev libghc-regex-compat-dev libghc-quickcheck2-dev cabal-install
-
-For older releases, you may have to use:
-  apt-get install ghc6 libghc6-parsec3-dev libghc6-quickcheck2-dev libghc6-json-dev libghc-regex-compat-dev cabal-install
-
-On Mac OS X with homebrew (http://brew.sh/), use:
-  brew install cabal-install
-
-On Mac OS X with MacPorts (http://www.macports.org/), use:
-  port install hs-cabal-install
-
-Executables can be built with cabal. Tests currently still rely on a Makefile.
-
-Install:
-  cabal install
-
-  which shellcheck
-  ~/.cabal/bin/shellcheck
-
-Happy ShellChecking!

README.md

@@ -0,0 +1,110 @@
+# ShellCheck - A shell script static analysis tool
+
+http://www.shellcheck.net
+
+Copyright 2012-2015, Vidar 'koala_man' Holen
+Licensed under the GNU General Public License, v3
+
+The goals of ShellCheck are:
+
+  - To point out and clarify typical beginner's syntax issues,
+    that causes a shell to give cryptic error messages.
+
+  - To point out and clarify typical intermediate level semantic problems,
+    that causes a shell to behave strangely and counter-intuitively.
+
+  - To point out subtle caveats, corner cases and pitfalls, that may cause an
+    advanced user's otherwise working script to fail under future circumstances.
+
+ShellCheck is written in Haskell, and requires 2 GB of memory to compile.
+
+## Installing
+
+On systems with Cabal:
+
+    cabal update
+    cabal install shellcheck
+
+On Debian based distros:
+
+    apt-get install shellcheck
+
+On OS X with homebrew:
+
+    brew install shellcheck
+
+ShellCheck is also available as an online service:
+
+    http://www.shellcheck.net
+
+## Building with Cabal
+
+This sections describes how to build ShellCheck from a source directory.
+
+First, make sure cabal is installed. On Debian based distros:
+
+    apt-get install cabal-install
+
+On Fedora:
+
+    yum install cabal-install
+
+On Mac OS X with homebrew (http://brew.sh/):
+
+    brew install cabal-install
+
+On Mac OS X with MacPorts (http://www.macports.org/):
+
+    port install hs-cabal-install
+
+On native Windows (https://www.haskell.org/platform/):
+
+    Download and install the latest version of the Haskell Platform.
+
+Let cabal update itself, in case your distro version is outdated:
+
+    $ cabal update
+    $ cabal install cabal-install
+
+With cabal installed, cd to the ShellCheck source directory and:
+
+    $ cabal install
+
+This will install ShellCheck to your `~/.cabal/bin` directory.
+
+Add the directory to your `PATH` (for bash, add this to your `~/.bashrc`):
+
+    export PATH="$HOME/.cabal/bin:$PATH"
+
+Verify that your PATH is set up correctly:
+
+    $ which shellcheck
+    ~/.cabal/bin/shellcheck
+
+On native Windows, the `PATH` should already be set up, but the system
+may use a legacy codepage. In `cmd.exe`, `powershell.exe` and Powershell ISE,
+make sure to use a TrueType font, not a Raster font, and set the active
+codepage to UTF-8 (65001) with `chcp`:
+
+    > chcp 65001
+    Active code page: 65001
+
+In Powershell ISE, you may need to additionally update the output encoding:
+
+    > [Console]::OutputEncoding = [System.Text.Encoding]::UTF8
+
+## Running tests
+
+To run the unit test suite:
+
+    cabal configure --enable-tests
+    cabal build
+    cabal test
+
+## Reporting bugs
+
+Please use the Github issue tracker for any bugs or feature suggestions:
+
+https://github.com/koalaman/shellcheck/issues
+
+Happy ShellChecking!

Setup.hs

@@ -1,2 +1,43 @@
-import Distribution.Simple
+import Distribution.PackageDescription (
-main = defaultMain
+  HookedBuildInfo,
+  emptyHookedBuildInfo )
+import Distribution.Simple (
+  Args,
+  UserHooks ( preSDist ),
+  defaultMainWithHooks,
+  simpleUserHooks )
+import Distribution.Simple.Setup ( SDistFlags )
+
+-- | This requires the process package from,
+--
+--   https://hackage.haskell.org/package/process
+--
+import System.Process ( callCommand )
+
+
+-- | This will use almost the default implementation, except we switch
+--   out the default pre-sdist hook with our own, 'myPreSDist'.
+--
+main = defaultMainWithHooks myHooks
+  where
+    myHooks = simpleUserHooks { preSDist = myPreSDist }
+
+
+-- | This hook will be executed before e.g. @cabal sdist@. It runs
+--   pandoc to create the man page from shellcheck.1.md. If the pandoc
+--   command is not found, this will fail with an error message:
+--
+--     /bin/sh: pandoc: command not found
+--
+--   Since the man page is listed in the Extra-Source-Files section of
+--   our cabal file, a failure here should result in a failure to
+--   create the distribution tarball (that's a good thing).
+--
+myPreSDist :: Args -> SDistFlags -> IO HookedBuildInfo
+myPreSDist _ _ = do
+  putStrLn "Building the man page..."
+  putStrLn pandoc_cmd
+  callCommand pandoc_cmd
+  return emptyHookedBuildInfo
+  where
+    pandoc_cmd = "pandoc -s -t man shellcheck.1.md -o shellcheck.1"

ShellCheck.cabal

@@ -1,15 +1,14 @@
 Name:             ShellCheck
--- Must also be updated in ShellCheck/Data.hs :
+Version:          0.4.1
-Version:          0.3.1
 Synopsis:         Shell script analysis tool
-License:          OtherLicense
+License:          GPL-3
 License-file:     LICENSE
 Category:         Static Analysis
 Author:           Vidar Holen
 Maintainer:       vidar@vidarholen.net
 Homepage:         http://www.shellcheck.net/
 Build-Type:       Simple
-Cabal-Version:    >= 1.6
+Cabal-Version:    >= 1.8
 Bug-reports:      https://github.com/koalaman/shellcheck/issues
 Description:
   The goals of ShellCheck are:
@@ -23,13 +22,71 @@ Description:
   * To point out subtle caveats, corner cases and pitfalls, that may cause an
     advanced user's otherwise working script to fail under future circumstances.
 
+Extra-Source-Files:
+    -- documentation
+    README.md
+    shellcheck.1.md
+    -- built with a cabal sdist hook
+    shellcheck.1
+    -- tests
+    test/shellcheck.hs
+
 source-repository head
     type: git
     location: git://github.com/koalaman/shellcheck.git
 
 library
-    build-depends: base >= 4, base < 5, parsec, containers, regex-compat, mtl, directory, json
+    build-depends:
-    exposed-modules: ShellCheck.AST, ShellCheck.Data, ShellCheck.Parser, ShellCheck.Analytics, ShellCheck.Simple
+      base >= 4 && < 5,
+      containers,
+      directory,
+      json,
+      mtl >= 2.2.1,
+      parsec,
+      regex-tdfa,
+      QuickCheck >= 2.7.4
+    exposed-modules:
+      ShellCheck.AST
+      ShellCheck.ASTLib
+      ShellCheck.Analytics
+      ShellCheck.Analyzer
+      ShellCheck.Checker
+      ShellCheck.Data
+      ShellCheck.Formatter.Format
+      ShellCheck.Formatter.CheckStyle
+      ShellCheck.Formatter.GCC
+      ShellCheck.Formatter.JSON
+      ShellCheck.Formatter.TTY
+      ShellCheck.Interface
+      ShellCheck.Parser
+      ShellCheck.Regex
+    other-modules:
+      Paths_ShellCheck
 
 executable shellcheck
+    build-depends:
+      ShellCheck,
+      base >= 4 && < 5,
+      containers,
+      directory,
+      json,
+      mtl >= 2.2.1,
+      parsec,
+      regex-tdfa,
+      QuickCheck >= 2.7.4
     main-is: shellcheck.hs
+
+test-suite test-shellcheck
+    type: exitcode-stdio-1.0
+    build-depends:
+      ShellCheck,
+      base >= 4 && < 5,
+      containers,
+      directory,
+      json,
+      mtl >= 2.2.1,
+      parsec,
+      regex-tdfa,
+      QuickCheck >= 2.7.4
+    main-is: test/shellcheck.hs
+

ShellCheck/AST.hs

@@ -1,25 +1,27 @@
 {-
+    Copyright 2012-2015 Vidar Holen
+
     This file is part of ShellCheck.
     http://www.vidarholen.net/contents/shellcheck
 
     ShellCheck is free software: you can redistribute it and/or modify
-    it under the terms of the GNU Affero General Public License as published by
+    it under the terms of the GNU General Public License as published by
     the Free Software Foundation, either version 3 of the License, or
     (at your option) any later version.
 
     ShellCheck is distributed in the hope that it will be useful,
     but WITHOUT ANY WARRANTY; without even the implied warranty of
     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU Affero General Public License for more details.
+    GNU General Public License for more details.
 
-    You should have received a copy of the GNU Affero General Public License
+    You should have received a copy of the GNU General Public License
     along with this program.  If not, see <http://www.gnu.org/licenses/>.
 -}
 module ShellCheck.AST where
 
 import Control.Monad
 import Control.Monad.Identity
-import qualified Text.Regex as Re
+import qualified ShellCheck.Regex as Re
 
 data Id = Id Int deriving (Show, Eq, Ord)
 
@@ -28,16 +30,15 @@ data Dashed = Dashed | Undashed deriving (Show, Eq)
 data AssignmentMode = Assign | Append deriving (Show, Eq)
 data FunctionKeyword = FunctionKeyword Bool deriving (Show, Eq)
 data FunctionParentheses = FunctionParentheses Bool deriving (Show, Eq)
+data CaseType = CaseBreak | CaseFallThrough | CaseContinue deriving (Show, Eq)
 
 data Token =
-    TA_Base Id String Token
+    TA_Binary Id String Token Token
-    | TA_Binary Id String Token Token
+    | TA_Expansion Id [Token]
-    | TA_Expansion Id Token
+    | TA_Index Id Token
-    | TA_Literal Id String
     | TA_Sequence Id [Token]
     | TA_Trinary Id Token Token Token
     | TA_Unary Id String Token
-    | TA_Variable Id String
     | TC_And Id ConditionType String Token Token
     | TC_Binary Id ConditionType String Token Token
     | TC_Group Id ConditionType Token
@@ -48,16 +49,17 @@ data Token =
     | T_AndIf Id (Token) (Token)
     | T_Arithmetic Id Token
     | T_Array Id [Token]
+    | T_IndexedElement Id Token Token
     | T_Assignment Id AssignmentMode String (Maybe Token) Token
     | T_Backgrounded Id Token
     | T_Backticked Id [Token]
     | T_Bang Id
     | T_Banged Id Token
-    | T_BraceExpansion Id String
+    | T_BraceExpansion Id [Token]
     | T_BraceGroup Id [Token]
     | T_CLOBBER Id
     | T_Case Id
-    | T_CaseExpression Id Token [([Token],[Token])]
+    | T_CaseExpression Id Token [(CaseType, [Token], [Token])]
     | T_Condition Id ConditionType Token
     | T_DGREAT Id
     | T_DLESS Id
@@ -70,6 +72,7 @@ data Token =
     | T_DollarDoubleQuoted Id [Token]
     | T_DollarExpansion Id [Token]
     | T_DollarSingleQuoted Id String
+    | T_DollarBraceCommandExpansion Id [Token]
     | T_Done Id
     | T_DoubleQuoted Id [Token]
     | T_EOF Id
@@ -102,7 +105,7 @@ data Token =
     | T_NormalWord Id [Token]
     | T_OR_IF Id
     | T_OrIf Id (Token) (Token)
-    | T_Pipeline Id [Token]
+    | T_Pipeline Id [Token] [Token] -- [Pipe separators] [Commands]
     | T_ProcSub Id String [Token]
     | T_Rbrace Id
     | T_Redirecting Id [Token] Token
@@ -120,20 +123,26 @@ data Token =
     | T_While Id
     | T_WhileExpression Id [Token] [Token]
     | T_Annotation Id [Annotation] Token
+    | T_Pipe Id String
+    | T_CoProc Id (Maybe String) Token
+    | T_CoProcBody Id Token
+    | T_Include Id Token Token -- . & source: SimpleCommand T_Script
     deriving (Show)
 
-data Annotation = DisableComment Integer deriving (Show, Eq)
+data Annotation = DisableComment Integer | SourceOverride String deriving (Show, Eq)
 data ConditionType = DoubleBracket | SingleBracket deriving (Show, Eq)
 
--- I apologize for nothing!
+-- This is an abomination.
-lolHax s = Re.subRegex (Re.mkRegex "(Id [0-9]+)") (show s) "(Id 0)"
+tokenEquals :: Token -> Token -> Bool
-instance Eq Token where
+tokenEquals a b = kludge a == kludge b
-    (==) a b = (lolHax a) == (lolHax b)
+    where kludge s = Re.subRegex (Re.mkRegex "\\(Id [0-9]+\\)") (show s) "(Id 0)"
 
+instance Eq Token where
+    (==) = tokenEquals
 
 analyze :: Monad m => (Token -> m ()) -> (Token -> m ()) -> (Token -> Token) -> Token -> m Token
-analyze f g i t =
+analyze f g i =
-    round t
+    round
   where
     round t = do
         f t
@@ -166,6 +175,8 @@ analyze f g i t =
     delve (T_DoubleQuoted id list) = dl list $ T_DoubleQuoted id
     delve (T_DollarDoubleQuoted id list) = dl list $ T_DollarDoubleQuoted id
     delve (T_DollarExpansion id list) = dl list $ T_DollarExpansion id
+    delve (T_DollarBraceCommandExpansion id list) = dl list $ T_DollarBraceCommandExpansion id
+    delve (T_BraceExpansion id list) = dl list $ T_BraceExpansion id
     delve (T_Backticked id list) = dl list $ T_Backticked id
     delve (T_DollarArithmetic id c) = d1 c $ T_DollarArithmetic id
     delve (T_DollarBracket id c) = d1 c $ T_DollarBracket id
@@ -177,12 +188,13 @@ analyze f g i t =
         b <- round value
         return $ T_Assignment id mode var a b
     delve (T_Array id t) = dl t $ T_Array id
+    delve (T_IndexedElement id t1 t2) = d2 t1 t2 $ T_IndexedElement id
     delve (T_Redirecting id redirs cmd) = do
         a <- roundAll redirs
         b <- round cmd
         return $ T_Redirecting id a b
     delve (T_SimpleCommand id vars cmds) = dll vars cmds $ T_SimpleCommand id
-    delve (T_Pipeline id l) = dl l $ T_Pipeline id
+    delve (T_Pipeline id l1 l2) = dll l1 l2 $ T_Pipeline id
     delve (T_Banged id l) = d1 l $ T_Banged id
     delve (T_AndIf id t u) = d2 t u $ T_AndIf id
     delve (T_OrIf id t u) = d2 t u $ T_OrIf id
@@ -205,10 +217,10 @@ analyze f g i t =
     delve (T_SelectIn id v w l) = dll w l $ T_SelectIn id v
     delve (T_CaseExpression id word cases) = do
         newWord <- round word
-        newCases <- mapM (\(c, t) -> do
+        newCases <- mapM (\(o, c, t) -> do
                             x <- mapM round c
                             y <- mapM round t
-                            return (x,y)
+                            return (o, x,y)
                         ) cases
         return $ T_CaseExpression id newWord newCases
 
@@ -241,9 +253,12 @@ analyze f g i t =
         b <- round t2
         c <- round t3
         return $ TA_Trinary id a b c
-    delve (TA_Expansion id t) = d1 t $ TA_Expansion id
+    delve (TA_Expansion id t) = dl t $ TA_Expansion id
-    delve (TA_Base id b t) = d1 t $ TA_Base id b
+    delve (TA_Index id t) = d1 t $ TA_Index id
     delve (T_Annotation id anns t) = d1 t $ T_Annotation id anns
+    delve (T_CoProc id var body) = d1 body $ T_CoProc id var
+    delve (T_CoProcBody id t) = d1 t $ T_CoProcBody id
+    delve (T_Include id includer script) = d2 includer script $ T_Include id
     delve t = return t
 
 getId t = case t of
@@ -289,15 +304,17 @@ getId t = case t of
         T_DollarBraced id _  -> id
         T_DollarArithmetic id _  -> id
         T_BraceExpansion id _  -> id
+        T_DollarBraceCommandExpansion id _  -> id
         T_IoFile id _ _  -> id
         T_HereDoc id _ _ _ _ -> id
         T_HereString id _  -> id
         T_FdRedirect id _ _  -> id
         T_Assignment id _ _ _ _  -> id
         T_Array id _  -> id
+        T_IndexedElement id _ _  -> id
         T_Redirecting id _ _  -> id
         T_SimpleCommand id _ _  -> id
-        T_Pipeline id _  -> id
+        T_Pipeline id _ _  -> id
         T_Banged id _  -> id
         T_AndIf id _ _ -> id
         T_OrIf id _ _ -> id
@@ -325,11 +342,9 @@ getId t = case t of
         TA_Binary id _ _ _  -> id
         TA_Unary id _ _  -> id
         TA_Sequence id _  -> id
-        TA_Variable id _  -> id
         TA_Trinary id _ _ _  -> id
         TA_Expansion id _  -> id
-        TA_Literal id _ -> id
+        TA_Index id _  -> id
-        TA_Base id _ _ -> id
         T_ProcSub id _ _ -> id
         T_Glob id _ -> id
         T_ForArithmetic id _ _ _ _ -> id
@@ -337,17 +352,14 @@ getId t = case t of
         T_DollarDoubleQuoted id _ -> id
         T_DollarBracket id _ -> id
         T_Annotation id _ _ -> id
+        T_Pipe id _ -> id
+        T_CoProc id _ _ -> id
+        T_CoProcBody id _ -> id
+        T_Include id _ _ -> id
 
 blank :: Monad m => Token -> m ()
 blank = const $ return ()
-doAnalysis f t = analyze f blank id t
+doAnalysis f = analyze f blank id
-doStackAnalysis startToken endToken t = analyze startToken endToken id t
+doStackAnalysis startToken endToken = analyze startToken endToken id
-doTransform i t = runIdentity $ analyze blank blank i t
+doTransform i = runIdentity . analyze blank blank i
 
-isLoop t = case t of
-        T_WhileExpression _ _ _  -> True
-        T_UntilExpression _ _ _  -> True
-        T_ForIn _ _ _ _  -> True
-        T_ForArithmetic _ _ _ _ _ -> True
-        T_SelectIn _ _ _ _  -> True
-        _ -> False

ShellCheck/ASTLib.hs

@@ -0,0 +1,240 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.ASTLib where
+
+import ShellCheck.AST
+
+import Control.Monad
+import Data.List
+import Data.Maybe
+
+-- Is this a type of loop?
+isLoop t = case t of
+        T_WhileExpression {} -> True
+        T_UntilExpression {} -> True
+        T_ForIn {} -> True
+        T_ForArithmetic {} -> True
+        T_SelectIn {}  -> True
+        _ -> False
+
+-- Will this split into multiple words when used as an argument?
+willSplit x =
+  case x of
+    T_DollarBraced {} -> True
+    T_DollarExpansion {} -> True
+    T_Backticked {} -> True
+    T_BraceExpansion {} -> True
+    T_Glob {} -> True
+    T_Extglob {} -> True
+    T_NormalWord _ l -> any willSplit l
+    _ -> False
+
+isGlob (T_Extglob {}) = True
+isGlob (T_Glob {}) = True
+isGlob (T_NormalWord _ l) = any isGlob l
+isGlob _ = False
+
+-- Is this shell word a constant?
+isConstant token =
+    case token of
+        T_NormalWord _ l   -> all isConstant l
+        T_DoubleQuoted _ l -> all isConstant l
+        T_SingleQuoted _ _ -> True
+        T_Literal _ _ -> True
+        _ -> False
+
+-- Is this an empty literal?
+isEmpty token =
+    case token of
+        T_NormalWord _ l   -> all isEmpty l
+        T_DoubleQuoted _ l -> all isEmpty l
+        T_SingleQuoted _ "" -> True
+        T_Literal _ "" -> True
+        _ -> False
+
+-- Quick&lazy oversimplification of commands, throwing away details
+-- and returning a list like  ["find", ".", "-name", "${VAR}*" ].
+oversimplify token =
+    case token of
+        (T_NormalWord _ l) -> [concat (concatMap oversimplify l)]
+        (T_DoubleQuoted _ l) -> [concat (concatMap oversimplify l)]
+        (T_SingleQuoted _ s) -> [s]
+        (T_DollarBraced _ _) -> ["${VAR}"]
+        (T_DollarArithmetic _ _) -> ["${VAR}"]
+        (T_DollarExpansion _ _) -> ["${VAR}"]
+        (T_Backticked _ _) -> ["${VAR}"]
+        (T_Glob _ s) -> [s]
+        (T_Pipeline _ _ [x]) -> oversimplify x
+        (T_Literal _ x) -> [x]
+        (T_SimpleCommand _ vars words) -> concatMap oversimplify words
+        (T_Redirecting _ _ foo) -> oversimplify foo
+        (T_DollarSingleQuoted _ s) -> [s]
+        (T_Annotation _ _ s) -> oversimplify s
+        -- Workaround for let "foo = bar" parsing
+        (TA_Sequence _ [TA_Expansion _ v]) -> concatMap oversimplify v
+        otherwise -> []
+
+
+-- Turn a SimpleCommand foo -avz --bar=baz into args "a", "v", "z", "bar",
+-- each in a tuple of (token, stringFlag).
+getFlagsUntil stopCondition (T_SimpleCommand _ _ (_:args)) =
+    let textArgs = takeWhile (not . stopCondition . snd) $ map (\x -> (x, concat $ oversimplify x)) args in
+        concatMap flag textArgs
+  where
+    flag (x, '-':'-':arg) = [ (x, takeWhile (/= '=') arg) ]
+    flag (x, '-':args) = map (\v -> (x, [v])) args
+    flag _ = []
+getFlagsUntil _ _ = error "Internal shellcheck error, please report! (getFlags on non-command)"
+
+-- Get all flags in a GNU way, up until --
+getAllFlags = getFlagsUntil (== "--")
+-- Get all flags in a BSD way, up until first non-flag argument
+getLeadingFlags = getFlagsUntil (not . ("-" `isPrefixOf`))
+
+
+-- Given a T_DollarBraced, return a simplified version of the string contents.
+bracedString (T_DollarBraced _ l) = concat $ oversimplify l
+bracedString _ = error "Internal shellcheck error, please report! (bracedString on non-variable)"
+
+-- Is this an expansion of multiple items of an array?
+isArrayExpansion t@(T_DollarBraced _ _) =
+    let string = bracedString t in
+        "@" `isPrefixOf` string ||
+            not ("#" `isPrefixOf` string) && "[@]" `isInfixOf` string
+isArrayExpansion _ = False
+
+-- Is it possible that this arg becomes multiple args?
+mayBecomeMultipleArgs t = willBecomeMultipleArgs t || f t
+  where
+    f t@(T_DollarBraced _ _) =
+        let string = bracedString t in
+            "!" `isPrefixOf` string
+    f (T_DoubleQuoted _ parts) = any f parts
+    f (T_NormalWord _ parts) = any f parts
+    f _ = False
+
+-- Is it certain that this word will becomes multiple words?
+willBecomeMultipleArgs t = willConcatInAssignment t || f t
+  where
+    f (T_Extglob {}) = True
+    f (T_Glob {}) = True
+    f (T_BraceExpansion {}) = True
+    f (T_DoubleQuoted _ parts) = any f parts
+    f (T_NormalWord _ parts) = any f parts
+    f _ = False
+
+-- This does token cause implicit concatenation in assignments?
+willConcatInAssignment token =
+    case token of
+        t@(T_DollarBraced {}) -> isArrayExpansion t
+        (T_DoubleQuoted _ parts) -> any willConcatInAssignment parts
+        (T_NormalWord _ parts) -> any willConcatInAssignment parts
+        _ -> False
+
+-- Maybe get the literal string corresponding to this token
+getLiteralString :: Token -> Maybe String
+getLiteralString = getLiteralStringExt (const Nothing)
+
+-- Definitely get a literal string, skipping over all non-literals
+onlyLiteralString :: Token -> String
+onlyLiteralString = fromJust . getLiteralStringExt (const $ return "")
+
+-- Maybe get a literal string, but only if it's an unquoted argument.
+getUnquotedLiteral (T_NormalWord _ list) =
+    liftM concat $ mapM str list
+  where
+    str (T_Literal _ s) = return s
+    str _ = Nothing
+getUnquotedLiteral _ = Nothing
+
+-- Maybe get the literal string of this token and any globs in it.
+getGlobOrLiteralString = getLiteralStringExt f
+  where
+    f (T_Glob _ str) = return str
+    f _ = Nothing
+
+-- Maybe get the literal value of a token, using a custom function
+-- to map unrecognized Tokens into strings.
+getLiteralStringExt :: (Token -> Maybe String) -> Token -> Maybe String
+getLiteralStringExt more = g
+  where
+    allInList = liftM concat . mapM g
+    g (T_DoubleQuoted _ l) = allInList l
+    g (T_DollarDoubleQuoted _ l) = allInList l
+    g (T_NormalWord _ l) = allInList l
+    g (TA_Expansion _ l) = allInList l
+    g (T_SingleQuoted _ s) = return s
+    g (T_Literal _ s) = return s
+    g x = more x
+
+-- Is this token a string literal?
+isLiteral t = isJust $ getLiteralString t
+
+
+-- Turn a NormalWord like foo="bar $baz" into a series of constituent elements like [foo=,bar ,$baz]
+getWordParts (T_NormalWord _ l)   = concatMap getWordParts l
+getWordParts (T_DoubleQuoted _ l) = l
+getWordParts other                = [other]
+
+-- Return a list of NormalWords that would result from brace expansion
+braceExpand (T_NormalWord id list) = take 1000 $ do
+    items <- mapM part list
+    return $ T_NormalWord id items
+  where
+    part (T_BraceExpansion id items) = do
+        item <- items
+        braceExpand item
+    part x = return x
+
+-- Maybe get the command name of a token representing a command
+getCommandName t =
+    case t of
+        T_Redirecting _ _ w -> getCommandName w
+        T_SimpleCommand _ _ (w:_) -> getLiteralString w
+        T_Annotation _ _ t -> getCommandName t
+        otherwise -> Nothing
+
+-- Get the basename of a token representing a command
+getCommandBasename = liftM basename . getCommandName
+  where
+    basename = reverse . takeWhile (/= '/') . reverse
+
+isAssignment t =
+    case t of
+        T_Redirecting _ _ w -> isAssignment w
+        T_SimpleCommand _ (w:_) [] -> True
+        T_Assignment {} -> True
+        T_Annotation _ _ w -> isAssignment w
+        otherwise -> False
+
+-- Get the list of commands from tokens that contain them, such as
+-- the body of while loops and if statements.
+getCommandSequences t =
+    case t of
+        T_Script _ _ cmds -> [cmds]
+        T_BraceGroup _ cmds -> [cmds]
+        T_Subshell _ cmds -> [cmds]
+        T_WhileExpression _ _ cmds -> [cmds]
+        T_UntilExpression _ _ cmds -> [cmds]
+        T_ForIn _ _ _ cmds -> [cmds]
+        T_ForArithmetic _ _ _ _ cmds -> [cmds]
+        T_IfExpression _ thens elses -> map snd thens ++ [elses]
+        otherwise -> []
+

ShellCheck/Analyzer.hs

@@ -0,0 +1,27 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Analyzer (analyzeScript) where
+
+import ShellCheck.Interface
+import ShellCheck.Analytics
+
+-- TODO: Clean up the cruft this is layered on
+analyzeScript :: AnalysisSpec -> AnalysisResult
+analyzeScript = runAnalytics

ShellCheck/Checker.hs

@@ -0,0 +1,159 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+{-# LANGUAGE TemplateHaskell #-}
+module ShellCheck.Checker (checkScript, ShellCheck.Checker.runTests) where
+
+import ShellCheck.Interface
+import ShellCheck.Parser
+import ShellCheck.Analyzer
+
+import Data.Either
+import Data.Functor
+import Data.List
+import Data.Maybe
+import Data.Ord
+import Control.Monad.Identity
+import qualified Data.Map as Map
+import qualified System.IO
+import Prelude hiding (readFile)
+import Control.Monad
+
+import Test.QuickCheck.All
+
+tokenToPosition map (TokenComment id c) = fromMaybe fail $ do
+    position <- Map.lookup id map
+    return $ PositionedComment position c
+  where
+    fail = error "Internal shellcheck error: id doesn't exist. Please report!"
+
+checkScript :: Monad m => SystemInterface m -> CheckSpec -> m CheckResult
+checkScript sys spec = do
+    results <- checkScript (csScript spec)
+    return CheckResult {
+        crFilename = csFilename spec,
+        crComments = results
+    }
+  where
+    checkScript contents = do
+        result <- parseScript sys ParseSpec {
+            psFilename = csFilename spec,
+            psScript = contents
+        }
+        let parseMessages = prComments result
+        let analysisMessages =
+                fromMaybe [] $
+                    (arComments . analyzeScript . analysisSpec)
+                        <$> prRoot result
+        let translator = tokenToPosition (prTokenPositions result)
+        return . nub . sortMessages . filter shouldInclude $
+            (parseMessages ++ map translator analysisMessages)
+
+    shouldInclude (PositionedComment _ (Comment _ code _)) =
+        code `notElem` csExcludedWarnings spec
+
+    sortMessages = sortBy (comparing order)
+    order (PositionedComment pos (Comment severity code message)) =
+        (posFile pos, posLine pos, posColumn pos, severity, code, message)
+    getPosition (PositionedComment pos _) = pos
+
+    analysisSpec root =
+        AnalysisSpec {
+            asScript = root,
+            asShellType = csShellTypeOverride spec,
+            asExecutionMode = Executed
+         }
+
+getErrors sys spec =
+    sort . map getCode . crComments $
+        runIdentity (checkScript sys spec)
+  where
+    getCode (PositionedComment _ (Comment _ code _)) = code
+
+check = checkWithIncludes []
+
+checkWithIncludes includes src =
+    getErrors
+        (mockedSystemInterface includes)
+        emptyCheckSpec {
+            csScript = src,
+            csExcludedWarnings = [2148]
+        }
+
+prop_findsParseIssue = check "echo \"$12\"" == [1037]
+
+prop_commentDisablesParseIssue1 =
+    null $ check "#shellcheck disable=SC1037\necho \"$12\""
+prop_commentDisablesParseIssue2 =
+    null $ check "#shellcheck disable=SC1037\n#lol\necho \"$12\""
+
+prop_findsAnalysisIssue =
+    check "echo $1" == [2086]
+prop_commentDisablesAnalysisIssue1 =
+    null $ check "#shellcheck disable=SC2086\necho $1"
+prop_commentDisablesAnalysisIssue2 =
+    null $ check "#shellcheck disable=SC2086\n#lol\necho $1"
+
+prop_optionDisablesIssue1 =
+    null $ getErrors
+                (mockedSystemInterface [])
+                emptyCheckSpec {
+                    csScript = "echo $1",
+                    csExcludedWarnings = [2148, 2086]
+                }
+
+prop_optionDisablesIssue2 =
+    null $ getErrors
+                (mockedSystemInterface [])
+                emptyCheckSpec {
+                    csScript = "echo \"$10\"",
+                    csExcludedWarnings = [2148, 1037]
+                }
+
+prop_canParseDevNull =
+    [] == check "source /dev/null"
+
+prop_failsWhenNotSourcing =
+    [1091, 2154] == check "source lol; echo \"$bar\""
+
+prop_worksWhenSourcing =
+    null $ checkWithIncludes [("lib", "bar=1")] "source lib; echo \"$bar\""
+
+prop_worksWhenDotting =
+    null $ checkWithIncludes [("lib", "bar=1")] ". lib; echo \"$bar\""
+
+prop_noInfiniteSourcing =
+    [] == checkWithIncludes  [("lib", "source lib")] "source lib"
+
+prop_canSourceBadSyntax =
+    [1094, 2086] == checkWithIncludes [("lib", "for f; do")] "source lib; echo $1"
+
+prop_cantSourceDynamic =
+    [1090] == checkWithIncludes [("lib", "")] ". \"$1\""
+
+prop_canSourceDynamicWhenRedirected =
+    null $ checkWithIncludes [("lib", "")] "#shellcheck source=lib\n. \"$1\""
+
+prop_sourceDirectiveDoesntFollowFile =
+    null $ checkWithIncludes
+                [("foo", "source bar"), ("bar", "baz=3")]
+                "#shellcheck source=foo\n. \"$1\"; echo \"$baz\""
+
+return []
+runTests = $quickCheckAll

ShellCheck/Data.hs

@@ -1,6 +1,10 @@
 module ShellCheck.Data where
 
-shellcheckVersion = "0.3.1"  -- Must also be updated in ShellCheck.cabal
+import ShellCheck.Interface
+import Data.Version (showVersion)
+import Paths_ShellCheck (version)
+
+shellcheckVersion = showVersion version
 
 internalVariables = [
     -- Generic
@@ -24,22 +28,10 @@ internalVariables = [
     "LC_MESSAGES", "LC_NUMERIC", "LINES", "MAIL", "MAILCHECK", "MAILPATH",
     "OPTERR", "PATH", "POSIXLY_CORRECT", "PROMPT_COMMAND",
     "PROMPT_DIRTRIM", "PS1", "PS2", "PS3", "PS4", "SHELL", "TIMEFORMAT",
-    "TMOUT", "TMPDIR", "auto_resume", "histchars",
+    "TMOUT", "TMPDIR", "auto_resume", "histchars", "COPROC",
 
-    -- Zsh
+    -- Other
-    "ARGV0", "BAUD", "cdpath", "COLUMNS", "CORRECT_IGNORE",
+    "USER", "TZ", "TERM"
-    "DIRSTACKSIZE", "ENV", "FCEDIT", "fignore", "fpath", "histchars",
-    "HISTCHARS", "HISTFILE", "HISTSIZE", "HOME", "IFS", "KEYBOARD_HACK",
-    "KEYTIMEOUT", "LANG", "LC_ALL", "LC_COLLATE", "LC_CTYPE",
-    "LC_MESSAGES", "LC_NUMERIC", "LC_TIME", "LINES", "LISTMAX",
-    "LOGCHECK", "MAIL", "MAILCHECK", "mailpath", "manpath", "module_path",
-    "NULLCMD", "path", "POSTEDIT", "PROMPT", "PROMPT2", "PROMPT3",
-    "PROMPT4", "prompt", "PROMPT_EOL_MARK", "PS1", "PS2", "PS3", "PS4",
-    "psvar", "READNULLCMD", "REPORTTIME", "REPLY", "reply", "RPROMPT",
-    "RPS1", "RPROMPT2", "RPS2", "SAVEHIST", "SPROMPT", "STTY", "TERM",
-    "TERMINFO", "TIMEFMT", "TMOUT", "TMPPREFIX", "watch", "WATCHFMT",
-    "WORDCHARS", "ZBEEP", "ZDOTDIR", "ZLE_LINE_ABORTED",
-    "ZLE_REMOVE_SUFFIX_CHARS", "ZLE_SPACE_SUFFIX_CHARS"
   ]
 
 variablesWithoutSpaces = [
@@ -74,3 +66,23 @@ commonCommands = [
     "val", "vi", "wait", "wc", "what", "who", "write", "xargs", "yacc",
     "zcat"
   ]
+
+sampleWords = [
+    "alpha", "bravo", "charlie", "delta", "echo", "foxtrot",
+    "golf", "hotel", "india", "juliett", "kilo", "lima", "mike",
+    "november", "oscar", "papa", "quebec", "romeo", "sierra",
+    "tango", "uniform", "victor", "whiskey", "xray", "yankee",
+    "zulu"
+  ]
+
+shellForExecutable :: String -> Maybe Shell
+shellForExecutable "sh" = return Sh
+shellForExecutable "ash" = return Sh
+shellForExecutable "dash" = return Sh
+
+shellForExecutable "ksh" = return Ksh
+shellForExecutable "ksh88" = return Ksh
+shellForExecutable "ksh93" = return Ksh
+
+shellForExecutable "bash" = return Bash
+shellForExecutable _ = Nothing

ShellCheck/Formatter/CheckStyle.hs

@@ -0,0 +1,82 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Formatter.CheckStyle (format) where
+
+import ShellCheck.Interface
+import ShellCheck.Formatter.Format
+
+import Data.Char
+import Data.List
+import GHC.Exts
+import System.IO
+
+format :: IO Formatter
+format = return Formatter {
+    header = do
+        putStrLn "<?xml version='1.0' encoding='UTF-8'?>"
+        putStrLn "<checkstyle version='4.3'>",
+
+    onFailure = outputError,
+    onResult = outputResult,
+
+    footer = putStrLn "</checkstyle>"
+}
+
+outputResult result contents = do
+    let comments = makeNonVirtual (crComments result) contents
+    putStrLn . formatFile (crFilename result) $ comments
+
+formatFile name comments = concat [
+    "<file ", attr "name" name, ">\n",
+        concatMap formatComment comments,
+    "</file>"
+    ]
+
+formatComment c = concat [
+    "<error ",
+    attr "line" $ show . lineNo $ c,
+    attr "column" $ show . colNo $ c,
+    attr "severity" . severity $ severityText c,
+    attr "message" $ messageText c,
+    attr "source" $ "ShellCheck.SC" ++ show (codeNo c),
+    "/>\n"
+    ]
+
+outputError file error = putStrLn $ concat [
+    "<file ", attr "name" file, ">\n",
+    "<error ",
+        attr "line" "1",
+        attr "column" "1",
+        attr "severity" "error",
+        attr "message" error,
+        attr "source" "ShellCheck",
+    "/>\n",
+    "</file>"
+    ]
+
+
+attr s v = concat [ s, "='", escape v, "' " ]
+escape = concatMap escape'
+escape' c = if isOk c then [c] else "&#" ++ show (ord c) ++ ";"
+isOk x = any ($x) [isAsciiUpper, isAsciiLower, isDigit, (`elem` " ./")]
+
+severity "error" = "error"
+severity "warning" = "warning"
+severity _ = "info"

ShellCheck/Formatter/Format.hs

@@ -0,0 +1,61 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Formatter.Format where
+
+import ShellCheck.Data
+import ShellCheck.Interface
+
+-- A formatter that carries along an arbitrary piece of data
+data Formatter = Formatter {
+    header ::  IO (),
+    onResult :: CheckResult -> String -> IO (),
+    onFailure :: FilePath -> ErrorMessage -> IO (),
+    footer :: IO ()
+}
+
+lineNo (PositionedComment pos _) = posLine pos
+colNo  (PositionedComment pos _) = posColumn pos
+codeNo (PositionedComment _ (Comment _ code _)) = code
+messageText (PositionedComment _ (Comment _ _ t)) = t
+
+severityText :: PositionedComment -> String
+severityText (PositionedComment _ (Comment c _ _)) =
+    case c of
+        ErrorC   -> "error"
+        WarningC -> "warning"
+        InfoC    -> "info"
+        StyleC   -> "style"
+
+-- Realign comments from a tabstop of 8 to 1
+makeNonVirtual comments contents =
+    map fix comments
+  where
+    ls = lines contents
+    fix c@(PositionedComment pos comment) = PositionedComment pos {
+        posColumn =
+            if lineNo c > 0 && lineNo c <= fromIntegral (length ls)
+            then real (ls !! fromIntegral (lineNo c - 1)) 0 0 (colNo c)
+            else colNo c
+    } comment
+    real _ r v target | target <= v = r
+    real [] r v _ = r -- should never happen
+    real ('\t':rest) r v target =
+        real rest (r+1) (v + 8 - (v `mod` 8)) target
+    real (_:rest) r v target = real rest (r+1) (v+1) target

ShellCheck/Formatter/GCC.hs

@@ -0,0 +1,54 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Formatter.GCC (format) where
+
+import ShellCheck.Interface
+import ShellCheck.Formatter.Format
+
+import Data.List
+import GHC.Exts
+import System.IO
+
+format :: IO Formatter
+format = return Formatter {
+    header = return (),
+    footer = return (),
+    onFailure = outputError,
+    onResult = outputResult
+}
+
+outputError file error = hPutStrLn stderr $ file ++ ": " ++ error
+
+outputResult result contents = do
+    let comments = makeNonVirtual (crComments result) contents
+    mapM_ (putStrLn . formatComment (crFilename result)) comments
+
+formatComment filename c = concat [
+    filename, ":",
+    show $ lineNo c, ":",
+    show $ colNo c, ": ",
+    case severityText c of
+        "error" -> "error"
+        "warning" -> "warning"
+        _ -> "note",
+    ": ",
+    concat . lines $ messageText c,
+    " [SC", show $ codeNo c, "]"
+  ]

ShellCheck/Formatter/JSON.hs

@@ -0,0 +1,58 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Formatter.JSON (format) where
+
+import ShellCheck.Interface
+import ShellCheck.Formatter.Format
+
+import Data.IORef
+import GHC.Exts
+import System.IO
+import Text.JSON
+
+format = do
+    ref <- newIORef []
+    return Formatter {
+        header = return (),
+        onResult = collectResult ref,
+        onFailure = outputError,
+        footer = finish ref
+    }
+
+instance JSON (PositionedComment) where
+  showJSON comment@(PositionedComment pos (Comment level code string)) = makeObj [
+      ("file", showJSON $ posFile pos),
+      ("line", showJSON $ posLine pos),
+      ("column", showJSON $ posColumn pos),
+      ("level", showJSON $ severityText comment),
+      ("code", showJSON code),
+      ("message", showJSON string)
+      ]
+
+  readJSON = undefined
+
+outputError file msg = hPutStrLn stderr $ file ++ ": " ++ msg
+collectResult ref result _ =
+    modifyIORef ref (\x -> crComments result ++ x)
+
+finish ref = do
+    list <- readIORef ref
+    putStrLn $ encodeStrict list
+

ShellCheck/Formatter/TTY.hs

@@ -0,0 +1,86 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Formatter.TTY (format) where
+
+import ShellCheck.Interface
+import ShellCheck.Formatter.Format
+
+import Data.List
+import GHC.Exts
+import System.Info
+import System.IO
+
+format :: IO Formatter
+format = return Formatter {
+    header = return (),
+    footer = return (),
+    onFailure = outputError,
+    onResult = outputResult
+}
+
+colorForLevel level = 
+    case level of
+        "error"   -> 31 -- red
+        "warning" -> 33 -- yellow
+        "info"    -> 32 -- green
+        "style"   -> 32 -- green
+        "message" -> 1 -- bold
+        "source"  -> 0 -- none
+        otherwise -> 0 -- none
+    
+outputError file error = do
+    color <- getColorFunc
+    hPutStrLn stderr $ color "error" $ file ++ ": " ++ error
+
+outputResult result contents = do
+    color <- getColorFunc
+    let comments = crComments result
+    let fileLines = lines contents
+    let lineCount = fromIntegral $ length fileLines
+    let groups = groupWith lineNo comments
+    mapM_ (\x -> do
+        let lineNum = lineNo (head x)
+        let line = if lineNum < 1 || lineNum > lineCount
+                        then ""
+                        else fileLines !! fromIntegral (lineNum - 1)
+        putStrLn ""
+        putStrLn $ color "message" $
+           "In " ++ crFilename result ++" line " ++ show lineNum ++ ":"
+        putStrLn (color "source" line)
+        mapM_ (\c -> putStrLn (color (severityText c) $ cuteIndent c)) x
+        putStrLn ""
+      ) groups
+
+cuteIndent :: PositionedComment -> String
+cuteIndent comment =
+    replicate (fromIntegral $ colNo comment - 1) ' ' ++
+        "^-- " ++ code (codeNo comment) ++ ": " ++ messageText comment
+
+code code = "SC" ++ show code
+
+getColorFunc = do
+    term <- hIsTerminalDevice stdout
+    let windows = "mingw" `isPrefixOf` os
+    return $ if term && not windows then colorComment else const id
+  where
+    colorComment level comment =
+        ansi (colorForLevel level) ++ comment ++ clear
+    clear = ansi 0
+    ansi n = "\x1B[" ++ show n ++ "m"

ShellCheck/Interface.hs

@@ -0,0 +1,103 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+module ShellCheck.Interface where
+
+import ShellCheck.AST
+import Control.Monad.Identity
+import qualified Data.Map as Map
+
+
+data SystemInterface m = SystemInterface {
+    -- Read a file by filename, or return an error
+    siReadFile :: String -> m (Either ErrorMessage String)
+}
+
+-- ShellCheck input and output
+data CheckSpec = CheckSpec {
+    csFilename :: String,
+    csScript :: String,
+    csExcludedWarnings :: [Integer],
+    csShellTypeOverride :: Maybe Shell
+} deriving (Show, Eq)
+
+data CheckResult = CheckResult {
+    crFilename :: String,
+    crComments :: [PositionedComment]
+} deriving (Show, Eq)
+
+emptyCheckSpec = CheckSpec {
+    csFilename = "",
+    csScript = "",
+    csExcludedWarnings = [],
+    csShellTypeOverride = Nothing
+}
+
+-- Parser input and output
+data ParseSpec = ParseSpec {
+    psFilename :: String,
+    psScript :: String
+} deriving (Show, Eq)
+
+data ParseResult = ParseResult {
+    prComments :: [PositionedComment],
+    prTokenPositions :: Map.Map Id Position,
+    prRoot :: Maybe Token
+} deriving (Show, Eq)
+
+-- Analyzer input and output
+data AnalysisSpec = AnalysisSpec {
+    asScript :: Token,
+    asShellType :: Maybe Shell,
+    asExecutionMode :: ExecutionMode
+}
+
+data AnalysisResult = AnalysisResult {
+    arComments :: [TokenComment]
+}
+
+-- Supporting data types
+data Shell = Ksh | Sh | Bash deriving (Show, Eq)
+data ExecutionMode = Executed | Sourced deriving (Show, Eq)
+
+type ErrorMessage = String
+type Code = Integer
+
+data Severity = ErrorC | WarningC | InfoC | StyleC deriving (Show, Eq, Ord)
+data Position = Position {
+    posFile :: String,    -- Filename
+    posLine :: Integer,   -- 1 based source line
+    posColumn :: Integer  -- 1 based source column, where tabs are 8
+} deriving (Show, Eq)
+
+data Comment = Comment Severity Code String deriving (Show, Eq)
+data PositionedComment = PositionedComment Position Comment deriving (Show, Eq)
+data TokenComment = TokenComment Id Comment deriving (Show, Eq)
+
+-- For testing
+mockedSystemInterface :: [(String, String)] -> SystemInterface Identity
+mockedSystemInterface files = SystemInterface {
+    siReadFile = rf
+}
+  where
+    rf file =
+        case filter ((== file) . fst) files of
+            [] -> return $ Left "File not included in mock."
+            [(_, contents)] -> return $ Right contents
+

ShellCheck/Regex.hs

@@ -0,0 +1,80 @@
+{-
+    Copyright 2012-2015 Vidar Holen
+
+    This file is part of ShellCheck.
+    http://www.vidarholen.net/contents/shellcheck
+
+    ShellCheck is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    ShellCheck is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+-}
+{-# LANGUAGE FlexibleContexts #-}
+
+-- Basically Text.Regex based on regex-tdfa instead of the buggy regex-posix.
+module ShellCheck.Regex where
+
+import Data.List
+import Data.Maybe
+import Control.Monad
+import Text.Regex.TDFA
+
+-- Precompile the regex
+mkRegex :: String -> Regex
+mkRegex str =
+    let make :: RegexMaker Regex CompOption ExecOption String => String -> Regex
+        make = makeRegex
+    in
+        make str
+
+-- Does the regex match?
+matches :: String -> Regex -> Bool
+matches = flip match
+
+-- Get all subgroups of the first match
+matchRegex :: Regex -> String -> Maybe [String]
+matchRegex re str = do
+    (_, _, _, groups) <- matchM re str :: Maybe (String,String,String,[String])
+    return groups
+
+-- Get all full matches
+matchAllStrings :: Regex -> String -> [String]
+matchAllStrings re = unfoldr f
+  where
+    f :: String -> Maybe (String, String)
+    f str = do
+        (_, match, rest, _) <- matchM re str :: Maybe (String, String, String, [String])
+        return (match, rest)
+
+-- Get all subgroups from all matches
+matchAllSubgroups :: Regex -> String -> [[String]]
+matchAllSubgroups re = unfoldr f
+  where
+    f :: String -> Maybe ([String], String)
+    f str = do
+        (_, _, rest, groups) <- matchM re str :: Maybe (String, String, String, [String])
+        return (groups, rest)
+
+-- Replace regex in input with string
+subRegex :: Regex -> String -> String -> String
+subRegex re input replacement = f input
+  where
+    f str = fromMaybe str $ do
+        (before, match, after) <- matchM re str :: Maybe (String, String, String)
+        when (null match) $ error ("Internal error: substituted empty in " ++ str)
+        return $ before ++ replacement ++ f after
+
+-- Split a string based on a regex.
+splitOn :: String -> Regex -> [String]
+splitOn input re =
+    case matchM re input :: Maybe (String, String, String) of
+        Just (before, match, after) -> before : after `splitOn` re
+        Nothing -> [input]

ShellCheck/Simple.hs

@@ -1,67 +0,0 @@
-{-
-    This file is part of ShellCheck.
-    http://www.vidarholen.net/contents/shellcheck
-
-    ShellCheck is free software: you can redistribute it and/or modify
-    it under the terms of the GNU Affero General Public License as published by
-    the Free Software Foundation, either version 3 of the License, or
-    (at your option) any later version.
-
-    ShellCheck is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU Affero General Public License for more details.
-
-    You should have received a copy of the GNU Affero General Public License
-    along with this program.  If not, see <http://www.gnu.org/licenses/>.
--}
-module ShellCheck.Simple (shellCheck, ShellCheckComment, scLine, scColumn, scSeverity, scCode, scMessage) where
-
-import ShellCheck.Parser
-import ShellCheck.Analytics
-import Data.Maybe
-import Text.Parsec.Pos
-import Data.List
-
-
-prop_findsParseIssue =
-    let comments = shellCheck "echo \"$12\"" [] in
-        (length comments) == 1 && (scCode $ head comments) == 1037
-prop_commentDisablesParseIssue1 =
-    null $ shellCheck "#shellcheck disable=SC1037\necho \"$12\"" []
-prop_commentDisablesParseIssue2 =
-    null $ shellCheck "#shellcheck disable=SC1037\n#lol\necho \"$12\"" []
-
-prop_findsAnalysisIssue =
-    let comments = shellCheck "echo $1" [] in
-        (length comments) == 1 && (scCode $ head comments) == 2086
-prop_commentDisablesAnalysisIssue1 =
-    null $ shellCheck "#shellcheck disable=SC2086\necho $1" []
-prop_commentDisablesAnalysisIssue2 =
-    null $ shellCheck "#shellcheck disable=SC2086\n#lol\necho $1" []
-
-shellCheck :: String -> [AnalysisOption] -> [ShellCheckComment]
-shellCheck script options =
-    let (ParseResult result notes) = parseShell "-" script in
-        let allNotes = notes ++ (concat $ maybeToList $ do
-            (tree, posMap) <- result
-            let list = runAnalytics options tree
-            return $ map (noteToParseNote posMap) $ filterByAnnotation tree list
-            )
-        in
-            map formatNote $ nub $ sortNotes allNotes
-
-data ShellCheckComment = ShellCheckComment { scLine :: Int, scColumn :: Int, scSeverity :: String, scCode :: Int, scMessage :: String }
-
-instance Show ShellCheckComment where
-    show c = concat ["(", show $ scLine c, ",", show $ scColumn c, ") ", scSeverity c, ": ", show (scCode c), " ", scMessage c]
-
-severityToString s =
-    case s of
-        ErrorC -> "error"
-        WarningC -> "warning"
-        InfoC -> "info"
-        StyleC -> "style"
-
-formatNote (ParseNote pos severity code text) =
-    ShellCheckComment (sourceLine pos) (sourceColumn pos) (severityToString severity) (fromIntegral code) text

shellcheck.1.md

@@ -16,25 +16,50 @@ errors and pitfalls where the shell just gives a cryptic error message or
 strange behavior, but it also reports on a few more advanced issues where
 corner cases can cause delayed failures.
 
+ShellCheck gives shell specific advice. Consider the line:
+
+    (( area = 3.14*r*r ))
+
++ For scripts starting with `#!/bin/sh` (or when using `-s sh`), ShellCheck
+will warn that `(( .. ))` is not POSIX compliant (similar to checkbashisms).
+
++ For scripts starting with `#!/bin/bash` (or using `-s bash`), ShellCheck
+will warn that decimals are not supported.
+
++ For scripts starting with `#!/bin/ksh` (or using `-s ksh`), ShellCheck will
+not warn at all, as `ksh` supports decimals in arithmetic contexts.
+
+
 # OPTIONS
 
-**-f** *FORMAT*, **--format=***FORMAT*
-
-:   Specify the output format of shellcheck, which prints its results in the
-    standard output. Subsequent **-f** options are ignored, see **FORMATS**
-    below for more information.
-
 **-e**\ *CODE1*[,*CODE2*...],\ **--exclude=***CODE1*[,*CODE2*...]
 
 :   Explicitly exclude the specified codes from the report. Subsequent **-e**
     options are cumulative, but all the codes can be specified at once,
     comma-separated as a single argument.
 
+**-f** *FORMAT*, **--format=***FORMAT*
+
+:   Specify the output format of shellcheck, which prints its results in the
+    standard output. Subsequent **-f** options are ignored, see **FORMATS**
+    below for more information.
+
 **-s**\ *shell*,\ **--shell=***shell*
 
-:   Specify Bourne shell dialect. Valid values are *sh*, *bash*, *ksh* and
+:   Specify Bourne shell dialect. Valid values are *sh*, *bash* and *ksh*.
-    *zsh*. The default is to use the file's shebang, or *bash* if the target
+    The default is to use the file's shebang, or *bash* if the target shell
-    shell can't be determined.
+    can't be determined.
+
+**-V**,\ **--version**
+
+:   Print version information and exit.
+
+**-x**,\ **-external-sources**
+
+:   Follow 'source' statements even when the file is not specified as input.
+    By default, `shellcheck` will only follow files specified on the command
+    line (plus `/dev/null`). This option allows following any file the script
+    may `source`.
 
 # FORMATS
 
@@ -79,11 +104,12 @@ corner cases can cause delayed failures.
 
         [
           {
-            "line": line,
+            "file": "filename",
-            "column": column,
+            "line": lineNumber,
-            "level": level,
+            "column": columnNumber,
-            "code": ####,
+            "level": "severitylevel",
-            "message": message
+            "code": errorCode,
+            "message": "warning message"
           },
           ...
         ]
@@ -100,6 +126,19 @@ For example, to suppress SC2035 about using `./*.jpg`:
     # shellcheck disable=SC2035
     echo "Files: " *.jpg
 
+To tell ShellCheck where to look for an otherwise dynamically determined file:
+
+    # shellcheck source=./lib.sh
+    source "$(find_install_dir)/lib.sh"
+
+Here a shell brace group is used to suppress a warning on multiple lines:
+
+    # shellcheck disable=SC2016
+    {
+      echo 'Modifying $PATH'
+      echo 'PATH=foo:$PATH' >> ~/.bashrc
+    }
+
 Valid keys are:
 
 **disable**
@@ -107,6 +146,18 @@ Valid keys are:
     The command can be a simple command like `echo foo`, or a compound command
     like a function definition, subshell block or loop.
 
+**source**
+:   Overrides the filename included by a `source`/`.` statement. This can be
+    used to tell shellcheck where to look for a file whose name is determined
+    at runtime, or to skip a source by telling it to use `/dev/null`.
+
+# ENVIRONMENT VARIABLES
+The environment variable `SHELLCHECK_OPTS` can be set with default flags:
+
+    export SHELLCHECK_OPTS='--shell=bash --exclude=SC2016'
+
+Its value will be split on spaces and prepended to the command line on each
+invocation.
 
 # AUTHOR
 ShellCheck is written and maintained by Vidar Holen.
@@ -116,6 +167,12 @@ Bugs and issues can be reported on GitHub:
 
 https://github.com/koalaman/shellcheck/issues
 
+# COPYRIGHT
+Copyright 2012-2015, Vidar Holen.
+Licensed under the GNU General Public License version 3 or later,
+see http://gnu.org/licenses/gpl.html
+
+
 # SEE ALSO
 
 sh(1) bash(1)

shellcheck.hs

@@ -1,232 +1,107 @@
 {-
+    Copyright 2012-2015 Vidar Holen
+
     This file is part of ShellCheck.
     http://www.vidarholen.net/contents/shellcheck
 
     ShellCheck is free software: you can redistribute it and/or modify
-    it under the terms of the GNU Affero General Public License as published by
+    it under the terms of the GNU General Public License as published by
     the Free Software Foundation, either version 3 of the License, or
     (at your option) any later version.
 
     ShellCheck is distributed in the hope that it will be useful,
     but WITHOUT ANY WARRANTY; without even the implied warranty of
     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU Affero General Public License for more details.
+    GNU General Public License for more details.
 
-    You should have received a copy of the GNU Affero General Public License
+    You should have received a copy of the GNU General Public License
     along with this program.  If not, see <http://www.gnu.org/licenses/>.
 -}
+import ShellCheck.Data
+import ShellCheck.Checker
+import ShellCheck.Interface
+import ShellCheck.Regex
+
+import ShellCheck.Formatter.Format
+import qualified ShellCheck.Formatter.CheckStyle
+import qualified ShellCheck.Formatter.GCC
+import qualified ShellCheck.Formatter.JSON
+import qualified ShellCheck.Formatter.TTY
+
 import Control.Exception
 import Control.Monad
+import Control.Monad.Except
 import Data.Char
+import Data.Functor
+import Data.Either
+import qualified Data.Map as Map
 import Data.Maybe
-import GHC.Exts
+import Data.Monoid
-import GHC.IO.Device
 import Prelude hiding (catch)
-import ShellCheck.Data
-import ShellCheck.Simple
-import ShellCheck.Analytics
 import System.Console.GetOpt
 import System.Directory
 import System.Environment
 import System.Exit
 import System.IO
-import Text.JSON
-import qualified Data.Map as Map
 
 data Flag = Flag String String
+data Status =
+    NoProblems
+    | SomeProblems
+    | BadInput
+    | SupportFailure
+    | SyntaxFailure
+    | RuntimeException
+  deriving (Ord, Eq, Show)
 
-header = "Usage: shellcheck [OPTIONS...] FILES..."
+instance Monoid Status where
+    mempty = NoProblems
+    mappend = max
+
+data Options = Options {
+    checkSpec :: CheckSpec,
+    externalSources :: Bool
+}
+
+defaultOptions = Options {
+    checkSpec = emptyCheckSpec,
+    externalSources = False
+}
+
+usageHeader = "Usage: shellcheck [OPTIONS...] FILES..."
 options = [
-    Option ['f'] ["format"]
+    Option "e" ["exclude"]
-        (ReqArg (Flag "format") "FORMAT") "output format",
-    Option ['e'] ["exclude"]
         (ReqArg (Flag "exclude") "CODE1,CODE2..") "exclude types of warnings",
-    Option ['s'] ["shell"]
+    Option "f" ["format"]
-        (ReqArg (Flag "shell") "SHELLNAME") "Specify dialect (bash,sh,ksh,zsh)",
+        (ReqArg (Flag "format") "FORMAT") "output format",
-    Option ['V'] ["version"]
+    Option "s" ["shell"]
+        (ReqArg (Flag "shell") "SHELLNAME") "Specify dialect (bash,sh,ksh)",
+    Option "x" ["external-sources"]
+        (NoArg $ Flag "externals" "true") "Allow 'source' outside of FILES.",
+    Option "V" ["version"]
         (NoArg $ Flag "version" "true") "Print version information"
     ]
 
-printErr = hPutStrLn stderr
+printErr = lift . hPutStrLn stderr
-
-syntaxFailure = ExitFailure 3
-supportFailure = ExitFailure 4
-
-instance JSON ShellCheckComment where
-  showJSON c = makeObj [
-      ("line", showJSON $ scLine c),
-      ("column", showJSON $ scColumn c),
-      ("level", showJSON $ scSeverity c),
-      ("code", showJSON $ scCode c),
-      ("message", showJSON $ scMessage c)
-      ]
-  readJSON = undefined
 
+parseArguments :: [String] -> ExceptT Status IO ([Flag], [FilePath])
 parseArguments argv =
     case getOpt Permute options argv of
-        (opts, files, []) -> do
+        (opts, files, []) -> return (opts, files)
-            verifyOptions opts files
-            return $ Just (opts, files)
-
         (_, _, errors) -> do
-            printErr $ (concat errors) ++ "\n" ++ usageInfo header options
+            printErr $ concat errors ++ "\n" ++ usageInfo usageHeader options
-            exitWith syntaxFailure
+            throwError SyntaxFailure
 
+formats :: Map.Map String (IO Formatter)
 formats = Map.fromList [
-    ("json", forJson),
+    ("checkstyle", ShellCheck.Formatter.CheckStyle.format),
-    ("gcc", forGcc),
+    ("gcc",  ShellCheck.Formatter.GCC.format),
-    ("checkstyle", forCheckstyle),
+    ("json", ShellCheck.Formatter.JSON.format),
-    ("tty", forTty)
+    ("tty",  ShellCheck.Formatter.TTY.format)
     ]
 
-forTty options files = do
-    output <- mapM doFile files
-    return $ and output
-  where
-    clear = ansi 0
-    ansi n = "\x1B[" ++ (show n) ++ "m"
-
-    colorForLevel "error" = 31 -- red
-    colorForLevel "warning" = 33 -- yellow
-    colorForLevel "info" = 32 -- green
-    colorForLevel "style" = 32 -- green
-    colorForLevel "message" = 1 -- bold
-    colorForLevel "source" = 0 -- none
-    colorForLevel _ = 0 -- none
-
-    colorComment level comment = (ansi $ colorForLevel level) ++ comment ++ clear
-
-    doFile path = do
-        contents <- readContents path
-        doInput path contents
-
-    doInput filename contents = do
-        let fileLines = lines contents
-        let lineCount = length fileLines
-        let comments = getComments options contents
-        let groups = groupWith scLine comments
-        colorFunc <- getColorFunc
-        mapM_ (\x -> do
-            let lineNum = scLine (head x)
-            let line = if lineNum < 1 || lineNum > lineCount
-                            then ""
-                            else fileLines !! (lineNum - 1)
-            putStrLn ""
-            putStrLn $ colorFunc "message" ("In " ++ filename ++" line " ++ (show $ lineNum) ++ ":")
-            putStrLn (colorFunc "source" line)
-            mapM (\c -> putStrLn (colorFunc (scSeverity c) $ cuteIndent c)) x
-            putStrLn ""
-          ) groups
-        return $ null comments
-
-    cuteIndent comment =
-        (replicate ((scColumn comment) - 1) ' ') ++ "^-- " ++ (code $ scCode comment) ++ ": " ++ (scMessage comment)
-
-    code code = "SC" ++ (show code)
-
-    getColorFunc = do
-        term <- hIsTerminalDevice stdout
-        return $ if term then colorComment else const id
-
--- This totally ignores the filenames. Fixme?
-forJson options files = do
-    comments <- liftM concat $ mapM (commentsFor options) files
-    putStrLn $ encodeStrict $ comments
-    return . null $ comments
-
--- Mimic GCC "file:line:col: (error|warning|note): message" format
-forGcc options files = do
-    files <- mapM process files
-    return $ and files
-  where
-    process file = do
-        contents <- readContents file
-        let comments = makeNonVirtual (getComments options contents) contents
-        mapM_ (putStrLn . format file) comments
-        return $ null comments
-
-    format filename c = concat [
-            filename, ":",
-            show $ scLine c, ":",
-            show $ scColumn c, ": ",
-            case scSeverity c of
-                "error" -> "error"
-                "warning" -> "warning"
-                _ -> "note",
-            ": ",
-            concat . lines $ scMessage c,
-            " [SC", show $ scCode c, "]"
-      ]
-
--- Checkstyle compatible output. A bit of a hack to avoid XML dependencies
-forCheckstyle options files = do
-    putStrLn "<?xml version='1.0' encoding='UTF-8'?>"
-    putStrLn "<checkstyle version='4.3'>"
-    statuses <- mapM (\x -> process x `catch` report) files
-    putStrLn "</checkstyle>"
-    return $ and statuses
-  where
-    process file = do
-        comments <- commentsFor options file
-        putStrLn (formatFile file comments)
-        return $ null comments
-    report error = do
-        printErr $ show (error :: SomeException)
-        return False
-
-    severity "error" = "error"
-    severity "warning" = "warning"
-    severity _ = "info"
-    attr s v = concat [ s, "='", escape v, "' " ]
-    escape msg = concatMap escape' msg
-    escape' c = if isOk c then [c] else "&#" ++ (show $ ord c) ++ ";"
-    isOk x = any ($x) [isAsciiUpper, isAsciiLower, isDigit, (`elem` " ./")]
-
-    formatFile name comments = concat [
-        "<file ", attr "name" name, ">\n",
-            concatMap format comments,
-        "</file>"
-        ]
-
-    format c = concat [
-        "<error ",
-        attr "line" $ show . scLine $ c,
-        attr "column" $ show . scColumn $ c,
-        attr "severity" $ severity . scSeverity $ c,
-        attr "message" $ scMessage c,
-        attr "source" $ "ShellCheck.SC" ++ (show $ scCode c),
-        "/>\n"
-        ]
-
-commentsFor options file =
-    liftM (getComments options) $ readContents file
-
-getComments options contents =
-    excludeCodes (getExclusions options) $ shellCheck contents analysisOptions
-  where
-    analysisOptions = catMaybes [ shellOption ]
-    shellOption = do
-        option <- getOption options "shell"
-        sh <- shellForExecutable option
-        return $ ForceShell sh
-
-
-readContents file = if file == "-" then getContents else readFile file
-
--- Realign comments from a tabstop of 8 to 1
-makeNonVirtual comments contents =
-    map fix comments
-  where
-    ls = lines contents
-    fix c = c { scColumn = real (ls !! (scLine c - 1)) 0 0 (scColumn c) }
-    real _ r v target | target <= v = r
-    real [] r v _ = r -- should never happen
-    real ('\t':rest) r v target =
-        real rest (r+1) (v + 8 - (v `mod` 8)) target
-    real (_:rest) r v target = real rest (r+1) (v+1) target
-
 getOption [] _ = Nothing
-getOption ((Flag var val):_) name | name == var = return val
+getOption (Flag var val:_) name | name == var = return val
 getOption (_:rest) flag = getOption rest flag
 
 getOptions options name =
@@ -237,7 +112,7 @@ split char str =
   where
     split' (a:rest) element =
         if a == char
-        then (reverse element) : split' rest []
+        then reverse element : split' rest []
         else split' rest (a:element)
     split' [] element = [reverse element]
 
@@ -247,54 +122,168 @@ getExclusions options =
     in
         map (Prelude.read . clean) elements :: [Int]
 
-excludeCodes codes comments =
+toStatus = liftM (either id id) . runExceptT
-    filter (not . hasCode) comments
+
+getEnvArgs = do
+    opts <- getEnv "SHELLCHECK_OPTS" `catch` cantWaitForLookupEnv
+    return . filter (not . null) $ opts `splitOn` mkRegex " +"
   where
-    hasCode c = scCode c `elem` codes
+    cantWaitForLookupEnv :: IOException -> IO String
+    cantWaitForLookupEnv = const $ return ""
 
 main = do
-    args <- getArgs
+    params <- getArgs
-    parsedArgs <- parseArguments args
+    envOpts  <- getEnvArgs
-    code <- do
+    let args = envOpts ++ params
-        status <- process parsedArgs
+    status <- toStatus $ do
-        return $ if status then ExitSuccess else ExitFailure 1
+        (flags, files) <- parseArguments args
-     `catch` return
+        process flags files
-     `catch` \err -> do
+    exitWith $ statusToCode status
-        printErr $ show (err :: SomeException)
-        return $ ExitFailure 2
-    exitWith code
 
-process Nothing = return False
+statusToCode status =
-process (Just (options, files)) = do
+    case status of
-  let format = fromMaybe "tty" $ getOption options "format" in
+        NoProblems -> ExitSuccess
-    case Map.lookup format formats of
+        SomeProblems -> ExitFailure 1
-        Nothing -> do
+        BadInput -> ExitFailure 5
-            printErr $ "Unknown format " ++ format
+        SyntaxFailure -> ExitFailure 3
-            printErr $ "Supported formats:"
+        SupportFailure -> ExitFailure 4
-            mapM_ (printErr . write) $ Map.keys formats
+        RuntimeException -> ExitFailure 2
-            exitWith supportFailure
-          where write s = "  " ++ s
-        Just f -> do
-            f options files
 
-verifyOptions opts files = do
+process :: [Flag] -> [FilePath] -> ExceptT Status IO Status
-    when (isJust $ getOption opts "version") printVersionAndExit
+process flags files = do
+    options <- foldM (flip parseOption) defaultOptions flags
+    verifyFiles files
+    let format = fromMaybe "tty" $ getOption flags "format"
+    formatter <-
+        case Map.lookup format formats of
+            Nothing -> do
+                printErr $ "Unknown format " ++ format
+                printErr "Supported formats:"
+                mapM_ (printErr . write) $ Map.keys formats
+                throwError SupportFailure
+              where write s = "  " ++ s
+            Just f -> ExceptT $ fmap Right f
+    sys <- lift $ ioInterface options files
+    lift $ runFormatter sys formatter options files
 
-    let shell = getOption opts "shell" in
+runFormatter :: SystemInterface IO -> Formatter -> Options -> [FilePath]
-        if isNothing shell
+            -> IO Status
-        then return ()
+runFormatter sys format options files = do
-        else when (isNothing $ shell >>= shellForExecutable) $ do
+    header format
-                printErr $ "Unknown shell: " ++ (fromJust shell)
+    result <- foldM f NoProblems files
-                exitWith supportFailure
+    footer format
+    return result
+  where
+    f :: Status -> FilePath -> IO Status
+    f status file = do
+        newStatus <- process file `catch` handler file
+        return $ status `mappend` newStatus
+    handler :: FilePath -> IOException -> IO Status
+    handler file e = do
+        onFailure format file (show e)
+        return RuntimeException
 
+    process :: FilePath -> IO Status
+    process filename = do
+        contents <- inputFile filename
+        let checkspec = (checkSpec options) {
+            csFilename = filename,
+            csScript = contents
+        }
+        result <- checkScript sys checkspec
+        onResult format result contents
+        return $
+            if null (crComments result)
+            then NoProblems
+            else SomeProblems
+
+parseOption flag options =
+    case flag of
+        Flag "shell" str ->
+            fromMaybe (die $ "Unknown shell: " ++ str) $ do
+                shell <- shellForExecutable str
+                return $ return options {
+                            checkSpec = (checkSpec options) {
+                                csShellTypeOverride = Just shell
+                            }
+                        }
+
+        Flag "exclude" str -> do
+            new <- mapM parseNum $ split ',' str
+            let old = csExcludedWarnings . checkSpec $ options
+            return options {
+                checkSpec = (checkSpec options) {
+                    csExcludedWarnings = new ++ old
+                }
+            }
+
+        Flag "version" _ -> do
+            liftIO printVersion
+            throwError NoProblems
+
+        Flag "externals" _ -> do
+            return options {
+                externalSources = True
+            }
+
+        _ -> return options
+  where
+    die s = do
+        printErr s
+        throwError SupportFailure
+    parseNum ('S':'C':str) = parseNum str
+    parseNum num = do
+        unless (all isDigit num) $ do
+            printErr $ "Bad exclusion: " ++ num
+            throwError SyntaxFailure
+        return (Prelude.read num :: Integer)
+
+ioInterface options files = do
+    inputs <- mapM normalize files
+    return SystemInterface {
+        siReadFile = get inputs
+    }
+  where
+    get inputs file = do
+        ok <- allowable inputs file
+        if ok
+          then (Right <$> inputFile file) `catch` handler
+          else return $ Left (file ++ " was not specified as input (see shellcheck -x).")
+
+      where
+        handler :: IOException -> IO (Either ErrorMessage String)
+        handler ex = return . Left $ show ex
+
+    allowable inputs x =
+        if externalSources options
+        then return True
+        else do
+            path <- normalize x
+            return $ path `elem` inputs
+
+    normalize x =
+        canonicalizePath x `catch` fallback x
+      where
+        fallback :: FilePath -> IOException -> IO FilePath
+        fallback path _ = return path
+
+inputFile file = do
+    contents <-
+            if file == "-"
+            then getContents
+            else readFile file
+
+    seq (length contents) $
+        return contents
+
+verifyFiles files =
     when (null files) $ do
         printErr "No files specified.\n"
-        printErr $ usageInfo header options
+        printErr $ usageInfo usageHeader options
-        exitWith syntaxFailure
+        throwError SyntaxFailure
 
-printVersionAndExit = do
+printVersion = do
-    putStrLn $ "ShellCheck - shell script analysis tool"
+    putStrLn   "ShellCheck - shell script analysis tool"
     putStrLn $ "version: " ++ shellcheckVersion
-    putStrLn $ "license: GNU Affero General Public License, version 3"
+    putStrLn   "license: GNU General Public License, version 3"
-    putStrLn $ "website: http://www.shellcheck.net"
+    putStrLn   "website: http://www.shellcheck.net"
-    exitWith ExitSuccess

test/quackCheck.hs

@@ -1,65 +0,0 @@
-#!/usr/bin/env runhaskell
--- #!/usr/bin/env runhugs
--- 	$Id: quickcheck,v 1.4 2003/01/08 15:09:22 shae Exp $	
--- This file defines a command
---      quickCheck <options> <files>
--- which invokes quickCheck on all properties defined in the files given as
--- arguments, by generating an input script for hugs and then invoking it.
--- quickCheck recognises the options
---      +names     print the name of each property before checking it
---      -names     do not print property names (the default)
---      +verbose   displays each test case before running
---      -verbose   do not displays each test case before running (the default)
--- Other options (beginning with + or -) are passed unchanged to hugs.
---
--- Change the first line of this file to the location of runhaskell or runhugs
--- on your system.
--- Make the file executable.
---
--- TODO:
--- someone on #haskell asked about supporting QC tests inside LaTeX, ex. \{begin} \{end}, how?
-
-import System.Cmd
-import System.Directory (findExecutable)
-import System.Environment
-import Data.List
-import Data.Maybe (fromJust)
-
-main :: IO ()
-main = do as<-getArgs
-          sequence_ (map (process (filter isOption as)) 
-	                 (filter (not.isOption) as))
-
--- ugly hack for .lhs files, is there a better way?
-unlit [] = []
-unlit x  = if (head x) == '>' then (tail x) else x
-
-process opts file =
-       let (namesOpt,opts') = getOption "names" "-names" opts
-           (verboseOpt,opts'') = getOption "verbose" "-verbose" opts' in
-       do xs<-readFile file
-          let names = nub$ filter (\x -> (("> prop_" `isPrefixOf` x) || ("prop_" `isPrefixOf` x)))
-	                (map (fst.head.lex.unlit) (lines xs)) 
-          if null names then
-	      putStr (file++": no properties to check\n")
-	    else do writeFile "hugsin"$
-	              unlines ((":load "++file):
-                          ":m +Test.QuickCheck":
-                          "let quackCheck p = quickCheckWith (stdArgs { maxSuccess = 1 }) p ":
-	                       [(if namesOpt=="+names" then 
-			           "putStr \""++p++": \" >> "
-				 else "") ++
-				("quackCheck ")
-				++ p | p<-names])
-                    -- To use ghci
-                    ghci <- findExecutable "ghci"
-	            system (fromJust ghci ++options opts''++" <hugsin")
-	            return ()
-
-isOption xs = head xs `elem` "-+"
-
-options opts = unwords ["\""++opt++"\"" | opt<-opts]
-
-getOption name def opts = 
-  let opt = head [opt | opt<-opts++[def], isPrefixOf name (drop 1 opt)] in
-    (opt, filter (/=opt) opts)

test/runQuack

@@ -1,22 +0,0 @@
-#!/bin/bash
-# Todo: Find a way to make this not suck.
-
-ulimit -t 60 # Sometimes GHC ends in a spin loop, and this is easier than debugging
-
-[[ -e test/quackCheck.hs ]] || { echo "Are you running me from the wrong directory?"; exit 1; }
-[[ $1 == -v ]] && pattern="" || pattern="FAIL"
-
-find . -name '*.hs' -exec bash -c '
-grep -v "^module " "$1" > quack.tmp.hs
-./test/quackCheck.hs +names quack.tmp.hs
-' -- {} \; 2>&1 | grep -i "$pattern"
-result=$?
-rm -f quack.tmp.hs hugsin
-
-if [[ $result == 0 ]]
-then
-  exit 1
-else
-  exit 0
-fi
-

test/shellcheck.hs

@@ -0,0 +1,18 @@
+module Main where
+
+import Control.Monad
+import System.Exit
+import qualified ShellCheck.Checker
+import qualified ShellCheck.Analytics
+import qualified ShellCheck.Parser
+
+main = do
+    putStrLn "Running ShellCheck tests..."
+    results <- sequence [
+        ShellCheck.Checker.runTests,
+        ShellCheck.Analytics.runTests,
+        ShellCheck.Parser.runTests
+      ]
+    if and results
+      then exitSuccess
+      else exitFailure